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An R package for fitting and analyzing linear, nonlinear and generalized linear mixed models.
Doxygen documentation of the underlying C functions is here.
The project summary page you can find here.
References to articles and other research using nlme or lme4 can be found here. The LaTeX bibliography file can be accessed from here. If you would like to add your work to this database, please email vasishth.shravan at gmail dot com
Slides from short courses on lme4 here.